PDB-MCP-Server

updated this year

A Model Context Protocol (MCP) server that provides access to the Protein Data Bank (PDB) - the worldwide repository of information about the 3D structures of proteins, nucleic acids, and complex assemblies.

Code-only MCP server: no hosted endpoint, so you install and run it yourself. It is not probed, graded or counted in our reachability statistics.

Get it

Repository: github.com/Augmented-Nature/PDB-MCP-Server
License: NOASSERTION
Last update: 2025-12-21
GitHub stars: ★ 28

bioinformatics drug-discovery mcp-server model-context-protocol protein-data-bank protein-structure

Listed in

github · source

Run this server as a hosted endpoint? Submit the endpoint and it moves to the remote directory, where it is probed and graded.